Révéler les différences dans le protéome


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Mohamed El-Far, Charles Pellerin, Louise Pilote, Jean-Francois Fortin, Ivan A D Lessard, Yoav Peretz, Elizabeth Wardrop, Patrick Salois, Richard C Bethell, Michael G Cordingley and George Kukolj
CD160 isoforms and regulation of CD4 and CD8 T-cell responses.
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Paul Drogaris, Valérie Villeneuve, Christelle Pomiès, Eun-Hye Lee, Véronique Bourdeau, Éric Bonneil, Gerardo Ferbeyre, Alain Verreault & Pierre Thibault.
Histone Deacetylase inhibitors globally enhance H3/H4 tail acetylation without affecting H3 Lysine 56 acetylation.
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Chaves-Olarte E, Guzmán-Verri C, Paramithiotis E, Moreno E (2011).
What have we learned from Brucella proteomics?

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Lamontagne J, Béland M, Forest A, Côté-Martin A, Nassif N, Tomaki F, Moriyón I, Moreno E, Paramithiotis E. Proteomics-based confirmation of protein expression and correction of annotation errors in the Brucella abortus genome.
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Lamontagne J, Forest A, Marazzo E, Denis F, Butler H, Michaud JF, Boucher L, Pedro I, Villeneuve A, Sitnikov D, Trudel K, Nassif N, Boudjelti D, Tomaki F, Chaves-Olarte E, Guzmán-Verri C, Brunet S, Côté-Martin A, Hunter J, Moreno E, Paramithiotis E.
Intracellular adaptation of Brucella abortus
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Hunter J, Paramithiotis E.
Protein biomarker quantification by mass spectrometry
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I. Jutras, M. Houde, N. Currier, J. Boulais, S. Duclos, S. LaBoissiere, E. Bonneil, P. Kearney, P. Thibault, E. Paramithiotis, P. Hugo, and M. Desjardins.
Modulation of the phagosome proteome by interferon-g.
Mol. Cell. Proteomics (2008) in press

P. Kearney, H. Butler, K. Eng, and P. Hugo
Protein identification and peptide expression resolver: harmonizing protein identification with protein expression data
J. Prot. Res. (2008) 7:234-244

J. Lamontagne, H. Butler, E. Chaves-Olarte, J. Hunter, M. Schirm, C. Paquet, M. Tian, P. Kearney, L. Hamaidi, D. Chelsky, I. Moriyon, E. Moreno, and E. Paramithiotis.
Extensive cell envelope modulation is associated with virulence in Brucella abortus.
J. Prot. Res. (2007) 6:1519-1529

K. Lekpor, M.J. Benoit, H. Butler, M. Schirm, D. Vasilescu, K. Bonter, D. Chelsky, P. Hugo, J. Hunter, G. Opiteck, E. Paramithiotis, and P. Kearney.
An evaluation of multidimensional fingerprinting in the context of clinical proteomics.
Proteomics Clin. Appll. (2007) 1:457-466

K. Sircar, L. Gaboury, L. Ouadi, M. Mecteau, E. Scarlata, F. Saad, A. Aprikian, S. Tanguay, S. Lapointe, C. Lussier, T. Miletti, and J. Lanoix.
Isolation of human prostatic epithelial plasma membranes for proteomics using mirror image tissue banking of radical prostatectomy specimens.
Clin Cancer Res. (2006) 15: 4178-4184.

M.T.Follettie, M.Pinard, J.C.Keith, Jr., L.Wand, D.Chelsky, C.Hayward, P.Kearney, P.Thibault, E.Paramithiotis, A.J.Dorner, and H.A.Harris
Organ Messenger Ribonucleic Acid and Plasma Proteome Changes in the Adjuvant-Induced Arthritis Model: Responses to Disease Induction and Therapy with the Estrogen Receptor-b Selective Agonist ERB-041
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D.Sitnikov, D.Chan, E.Thibaudeau, M.Pinard, J.M.Hunter
Protein Depletion from Blood Plasma using a Volatile Buffer
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E.Bonneil, S.Tessier, A.Carrier, P.Thibault
Multiplex Multidimensional NanoLC-MS System for Targeted Proteomic Analyses
Electrophoresis (2005) 26: 4575-4589

K.Venne, E.Bonneil, K.Eng, and P.Thibault
Improvement in Peptide Detection for Proteomics Analysis Using NanoLC-MS and High-Field Asymmetry Waveform Ion Mobility Mass Spectrometry
Anal. Chem. (2005) 77: 2176-2186

M.H.Fortier, E.Bonneil, P.Goodley, and P.Thibault
Integrated Microfluidic Device for Mass Spectrometry-Based Proteomics and Its Application to Biomarker Discovery Programs
Anal. Chem. (2005) 77: 1631-1640

P.Kearney, D.Jaitly, R.Belanger, and P.Thibault
MS/MS Peak Identification and its Applications
Proceedings of Intelligent Systems for Molecular Biology (2004)

P.Thibault, A.Martin, M.Gilbert, W.W.Wakarchuk, and J.C.Richards
Analysis of Bacterial Glycolipids by Capillary Electrophoresis-Electrospray Mass Spectrometry: Haemophilus influenzae and Neisseria meningitidis Lipopolysaccharides
Methods Mol.Biol. (2003) 213: 241-259

P.Kearney and P.Thibault
Bioinformatics Meets Proteomics-Bridging the Gap Between Mass Spectrometry Data Analysis and Cell Biology
J.Bioinformatics and Computational Biology (2003) 1:183-200

J.Bergeron, M.Desjardins, P.Kearney and P.Thibault
Organelle Proteomics: Looking at Less to See More
Trends in Cell Biology (2003) 13: 629-638

ER-Mediated Phagocytosis: A New Membrane for New Functions
Nature Reviews Immunology (2003) 3:280-291

M.Houde, S.Bertholet, E.Gagnon, S.Brunet, G.Goyette, A.Laplante, M.F.Princiotta, P.Thibault, D.Sacks, and M.Desjardins
Phagosomes are Competent Organelles for Antigen Cross-Presentation
Nature (2003) 425: 402-406

E. Gagnon, S.Duclos, C.Rondeau, E.Chevet, P.H.Cameron, O.Steele-Mortimer, J.Paiement, J.J.M.Bergeron, and M.Desjardins
Endoplasmic Reticulum-Mediated Phagocytosis Is a Mechanism of Entry into Macrophages
Cell (2002) 110: 119-131

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